Warning: Data is of class matrix. Coercing to dgCMatrix. Warning: The default method for RunUMAP has changed from calling Python UMAP via reticulate to the R-native UWOT using the cosine metric To use Python UMAP via reticulate, set umap.method to 'umap-learn' and metric to 'correlation' This message will be shown once per session Warning: Scaling data with a low number of groups may produce misleading results Completed synthetic Seurat/ggplot2 example. Seed: 20261023 Cells: 48 Features: 36 Reductions: pca, umap Figures: /workspace/website-review/OmicsHub/images/tutorial-figures/visualization-synthetic-umap.png /workspace/website-review/OmicsHub/images/tutorial-figures/visualization-synthetic-feature.png /workspace/website-review/OmicsHub/images/tutorial-figures/visualization-synthetic-dotplot.png /workspace/website-review/OmicsHub/images/tutorial-figures/visualization-synthetic-composition.png Package versions: Seurat 5.0.1 SeuratObject 5.0.1 ggplot2 3.4.4 uwot 0.1.16